Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797072.1_cds_XP_016453159.1_4688
CDS Infomation

[gene=LOC107777616] [db_xref=GeneID:107777616] [protein=probable pectinesterase 53] [protein_id=XP_016453159.1] [location=join(54733..55067,55247..55436,56041..56483,56681..56831)] [gbkey=CDS]
Sequence

ATGGCTACTTCAAGGACGAGATTACTAGAGTTGCTTTTTATCTTAATTTTATTGTTTGCT
ATTAGTGCAAATGCTAAAAGGGGTAAACATTCTAGGAGGCAGAATAAGTTGAAAGTGGCT
AATGAAGATGGTTTCTTGAATTGGATTAATCGCATTAGTTCTCGCAATCATTCTGTCTTC
CACGAAGCGAAGAACAAATTTGAGCCTTGCAAATTTATTAAGGTGAATAAAAACCCAAAG
CATGGAGATTTTACTACGGTTCAAGAGGCTATTGATTCAATTCCAATTGCCAATTCTTGT
CGAGTGGTTATTTCTGTTAGTCCTGGGATTTACAGGGAGAAGATTGAAATTCCAGCAACA
ATGGCATACATTACACTGGAAGGTGCTAGTTCGCGCAAAACGACTATCAAATGGGATGAC
ACTGCAGATAGGGTAGGAAAAGATGGCCAGCCAATGGGAACGTATGGTTCTGCAACGTTT
GCTGTTAATTCCCCCTACTTCATTGCCAAAAACATCACCTTTAAGAATGTAGCACCACCA
CCACCATCAGGGGCACTGGGAAAGCAAGCTGTGGCATTAAGAATCTCCGCAGACACAGCG
GCGTTTATAAATTGCAAATTCATAGGAGCACAAGATACATTGTATGATCACAGGGGCAGG
CATTATTTCAAGAACTGCTATATACAAGGTTCTGTGGATTTTATATTTGGAGATGGGTTG
TCCCTCTACGAGAATTGTCACTTAAATGCCAAAACAAAAAGCTATGGGGCATTGACAGCC
CAGAAGAGGGAGAGCATGCTGGAGGAAACTGGATTCTCTTTTGTGAATTGCAAGGTTACT
GGATCTGGTGCTCTTTACCTGGGCAGGGCTTGGGGTACTTTCTCAAGGGTCATATTTGCT
TACACTTACATGGATAAGATCATCACTTCAAAGGGATGGTATGACTGGGGGGATAAGAAC
AGGCATATGACGGTATTTTATGGGCAATTCAAGTGTTCGGGACCAGGGGCAAACCACGGT
GGCAGGGTGAAATGGTCCAGGGAGCTCACTGAACAAGAAGCTAATCCGTTTGTCTCACTC
AGCTTCATCGATGGTCATGAATGGCTTCTCAATATTTGA

Peptide Sequence

PEP ID

XP_016453159.1
PEP Infomation

PREDICTED: probable pectinesterase 53 [Nicotiana tabacum]
Sequence

MATSRTRLLELLFILILLFAISANAKRGKHSRRQNKLKVANEDGFLNWINRISSRNHSVF
HEAKNKFEPCKFIKVNKNPKHGDFTTVQEAIDSIPIANSCRVVISVSPGIYREKIEIPAT
MAYITLEGASSRKTTIKWDDTADRVGKDGQPMGTYGSATFAVNSPYFIAKNITFKNVAPP
PPSGALGKQAVALRISADTAAFINCKFIGAQDTLYDHRGRHYFKNCYIQGSVDFIFGDGL
SLYENCHLNAKTKSYGALTAQKRESMLEETGFSFVNCKVTGSGALYLGRAWGTFSRVIFA
YTYMDKIITSKGWYDWGDKNRHMTVFYGQFKCSGPGANHGGRVKWSRELTEQEANPFVSL
SFIDGHEWLLNI

Transcript Sequence

Gene sequence data has not been registered.